ciliatedness --> ciliated + add mono and multi ciliated

dosumis commented 4 months ago

Fixes #561

@rays22 - I'd like to get this out ASAP as needed for multiple HCA projects. Could you give it a quick review. Thanks!

dosumis commented 4 months ago

CC @Caroline-99

sbello commented 3 months ago

Nico asked me to look at this today, I know it has been merged but I have a couple comments/questions

Is there a reason you didn't use the GO definition of cilum (GO:0005929)?
Personally circular definitions bug me, so defining ciliated as having cilia without defining cilia feels insufficient to me. I would have used part of the GO definition of cilia in the definition 'specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts' So the definition would be A cellular quality inhering in a bearer by virtue of the bearer's having as a part one or more organelles consisting of a filiform extrusion of the cell surface and of some cytoplasmic parts.

If the term is not meant to define cilia as in GO it would be good to clarify the definition to make this clear.

rays22 commented 3 months ago

I had taken the CGI (General Class Axiom) associated with ciliated into consideration (which does reference GO cilium) in my review, and I saw no need to request changes in @dosumis 's textual definition:

dosumis commented 2 months ago

@sbello - as Ray notes - we do have a link to GO - via GCI. This was a major motivation for me in adding the term. Not keen to copy and paste text from GO term def as GO term may evolve.

pato-ontology / pato

ciliatedness --> ciliated + add mono and multi ciliated #562