pemsley / coot

Software for macromolecular model-building
http://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
GNU General Public License v3.0
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Numbering in Rotamer analysis graph does not match chain #148

Open olibclarke opened 4 months ago

olibclarke commented 4 months ago

Hi Paul, the numbering in the rotamer analysis graph does not match the structure numbering - this is confusing. E.g. in the tutorial model, clicking the residue marked 70 takes me to residue 84. I assume this is because it is numbering starting from 1 as the first residue, even if the sequence number doesn't matched, but is this intended?

image

Also, the old coot graphs for the rotamers clearly highlight the true outliers (for the same tutorial model) - it seems clearer to me than the new display, even though the underlying data is presumably the same?

image

Also, for these validation graphs - the bars are clickable which is great, but only the bars - this becomes a problem, when outliers have short/non-existent bars, as it becomes very hard to navigate to the outlier - you need to click on exactly the right pixel to have it respond. I think it would be better if the entire column was the click-target, regardless of the height of the bar.

It would also be useful to add hover-over residue information & stats for each bar, as is the case in the old coot validation graphs.