Update schemes for tb_speciation and typhi, including metadata

phac-nml / biohansel

Rapidly subtype microbial genomes using single-nucleotide variant (SNV) subtyping schemes

Apache License 2.0

25 stars 7 forks source link

Update schemes for tb_speciation and typhi, including metadata #102

Closed glabbe closed 5 years ago

glabbe commented 5 years ago

Schemes updated after QC module fix: update tb_speciation scheme to v1.0.5 with associated metadata, and Typhi scheme to v1.2.0, with attached metadata

tb_speciation_scheme_v1.0.5.txt tb_speciation_v105_metadata.txt Typhi_scheme_v1.2.0.txt Typhi_schemev1.2.0_metadata_Wong_et_al_genotypes.txt

DarianHole commented 5 years ago

Hi @glabbe,

I'll get to work updating these and testing their inclusion now

glabbe commented 5 years ago

Thanks @DarianHole , and please check for extra semicolons as mentioned by Peter in issue #99

DarianHole commented 5 years ago

Fixed in #103