phac-nml / biohansel

Rapidly subtype microbial genomes using single-nucleotide variant (SNV) subtyping schemes
Apache License 2.0
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Rename tb_speciation to tb_lineage #110

Closed DarianHole closed 5 years ago

DarianHole commented 5 years ago

Small change addressing #107

Command for TB changed from tb_speciation to tb_lineage and would still be used as normal. Ex:

hansel -s tb_lineage -o results.tsv -D ./example/directory

-- Need to change the readme to reflect this (and some of the other changes) along with the read the docs after