phac-nml / biohansel

Rapidly subtype microbial genomes using single-nucleotide variant (SNV) subtyping schemes
Apache License 2.0
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Update to S. Typhi scheme and metadata #129

Closed glabbe closed 3 years ago

glabbe commented 3 years ago

7 new genotypes were added to the S. Typhi scheme, and S. Typhi metadata table was updates with these additional genotypes and with results from an analysis of ~8,100 public S. Typhi genomes in new metadata fields. Readme was updated with 3 additional citations for the expanded S. Typhi scheme. This addresses Issue #128