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pinellolab
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CRISPResso2
Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
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ERROR：HDR number in the plot not the same as the number in txt file
#448
Masterchiefm
closed
1 week ago
2
Numpy Error
#447
ahrimj21
opened
1 week ago
6
High % of "AMBIGUOUS" reads – what are they?
#446
francoiskroll
closed
1 week ago
3
slots implementation
#445
mbowcut2
closed
1 week ago
0
Fix Cython types and improve output consistency
#444
Colelyman
closed
2 weeks ago
0
fix testRlease, ref name changes, adjust paths relative to tests dire…
#443
fizwit
opened
2 weeks ago
0
Question about CRISPResso for WGS - and potential feature
#442
tanyasarkjain
opened
2 weeks ago
1
Error message: alignment amplicon sequence to reads
#441
dbudinger
closed
3 weeks ago
3
A small mistake in 'CRISPResso_quantification_of_editing_frequency.txt'
#440
lpcv0309
closed
1 month ago
1
exclude UNMAP,SECONDARY,QCFAIL,DUP,SUPPLEMENTARY
#439
wulj2
opened
1 month ago
0
Fix typo and move flexiguide to debug (#77)
#438
Colelyman
closed
1 month ago
0
ERROR: NUMPY RELATED
#437
ZhongxuanZhang
opened
1 month ago
1
CRISPRessoAgregate
#435
xguo-nveloptx
opened
1 month ago
0
Prefix the release Docker tag with a `v`
#434
Colelyman
closed
1 month ago
0
ERROR: Offset around cut would be greater than reference sequence length.
#433
albustruong
opened
1 month ago
2
Showing sgRNA sequences on hover in CRISPRessoPro
#432
Colelyman
closed
1 month ago
0
Fix plots and improve plot error handling
#431
Colelyman
closed
1 month ago
0
Fix issues with `file_prefix`
#430
Colelyman
closed
2 months ago
0
Fix batch mode pandas warning. (#70)
#429
Colelyman
closed
2 months ago
0
Bump version to 2.3.1 and change default CRISPRessoPooled behavior to change in 2.3.2
#428
Colelyman
closed
2 months ago
0
Fix status file name
#427
Colelyman
closed
2 months ago
0
Confused about sequence directions in prime editing parameters
#426
francoiskroll
opened
2 months ago
6
Extract `jinja_partials` and fix CRISPRessoPooled fastp errors
#425
Colelyman
closed
2 months ago
0
Update README
#424
Colelyman
closed
2 months ago
0
Fix CRISPRessoPooled error reporting
#423
kclem
closed
2 months ago
0
Remove extra imports from CRISPRessoCore
#422
Colelyman
closed
2 months ago
0
Cole/refactor jinja undefined (#66)
#421
Colelyman
closed
2 months ago
0
Allele plot doesn't show base letter
#420
albustruong
closed
2 months ago
2
Updated README
#419
trevormartinj7
closed
2 months ago
0
Fix Jinja2 undefined variables
#417
Colelyman
closed
2 months ago
0
How to solve Error 0?
#416
ShawnYuXX
closed
2 months ago
4
Fastp, args as data, guardrails, and PE fix
#415
Colelyman
closed
2 months ago
0
Fix args in manifest
#414
Colelyman
closed
2 months ago
0
Round guardrails
#413
Snicker7
closed
2 months ago
0
Round guardrails
#412
Snicker7
closed
2 months ago
0
CRIPSResso2 package not included in channel
#411
AnnMue
closed
2 months ago
1
Fix plotly import
#410
Snicker7
closed
2 months ago
0
Fix plotly import
#409
Snicker7
closed
2 months ago
0
Args As Data
#408
trevormartinj7
closed
2 months ago
0
INDELs not recognized in the allele frequency table
#406
yifanzhou123
closed
3 months ago
2
Alleles frequency table plot not generated
#405
JNWorkman
closed
2 months ago
3
Decrease Docker image size and fix PE naming and parameter behavior
#404
Colelyman
closed
3 months ago
0
Fix the assignment of multiple quantification window coordinates
#403
Colelyman
closed
3 months ago
0
Base "N" in allele frequency quilts plot
#402
xguo-nveloptx
closed
3 months ago
2
custom plot script
#401
xguo-nveloptx
closed
3 months ago
3
fix `space` character in README
#400
DennyDai
closed
2 months ago
0
Pr on open
#399
Snicker7
closed
3 months ago
0
GitHub actions on PR
#398
Snicker7
closed
3 months ago
0
Move read filtering to after merging in CRISPResso
#397
Colelyman
closed
3 months ago
1
Errors thrown when giving amplicon_seq in lower case.
#396
francoiskroll
closed
2 months ago
0
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