plazi / treatmentBank

Repository devoted to house keeping of treatmentBank
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habitat vs figures: possiblity to annotate as well? #97

Closed myrmoteras closed 1 year ago

myrmoteras commented 1 year ago

@gsautter in this monograph series, the figures are split into Figures proper and Habitus - colorimages of the habitus. https://doi.org/10.5281/zenodo.8074943 . Is there a chance to annotate the habitus similar to figures so that they also show up in BLR? tx

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flsimoes commented 1 year ago

Marking the captions is likely the easiest bit, but the "habitus citations", which I'm guessing are something like "Hab. 1", might require an update to GGI.

gsautter commented 1 year ago

If you annotate the captions, the figures should go to BLR, sure ... it's just that "Habitus" is caption start I've never seen before, and right now we sure don't have any pattern that would catch such captions ... what does "habitus" even mean? sounds a bit like "habit" or "behavior" ...

gsautter commented 1 year ago

Marking the captions is likely the easiest bit, but the "habitus citations", which I'm guessing are something like "Hab. 1", might require an update to GGI.

Most likely ... unless you mark them manually or by means of "Annotate All" and then link them manually ... how frequent is this caption start?

gsautter commented 1 year ago

Marking the captions is likely the easiest bit, but the "habitus citations", which I'm guessing are something like "Hab. 1", might require an update to GGI.

Even though this would need an update, it would likely be a small one ... only need to add this specific caption start word.

Are there other such exotic caption starts you're aware of? Might just as well add those, too ...

flsimoes commented 1 year ago

If you annotate the captions, the figures should go to BLR, sure ... it's just that "Habitus" is caption start I've never seen before, and right now we sure don't have any pattern that would catch such captions ... what does "habitus" even mean? sounds a bit like "habit" or "behavior" ...

habitus is the general morphology, that's why the figures with those captions are of the whole specimen.

gsautter commented 1 year ago

If you annotate the captions, the figures should go to BLR, sure ... it's just that "Habitus" is caption start I've never seen before, and right now we sure don't have any pattern that would catch such captions ... what does "habitus" even mean? sounds a bit like "habit" or "behavior" ...

habitus is the general morphology, that's why the figures with those captions are of the whole specimen.

Thanks! simply good to know ...

myrmoteras commented 1 year ago

Marking the captions is likely the easiest bit, but the "habitus citations", which I'm guessing are something like "Hab. 1", might require an update to GGI.

Even though this would need an update, it would likely be a small one ... only need to add this specific caption start word.

Are there other such exotic caption starts you're aware of? Might just as well add those, too ...

At the moment, I am not aware of. So I think we should not start another project to explore but rather add 'Habitus' and 'Hab. X' for now. The challenge might be the size of these publications.

gsautter commented 1 year ago

Added "Habitus" and "Hab." to the caption starts now, comes with net update. You might also be able to use a template with some custom caption start patterns to get them tagged, actually.

flsimoes commented 1 year ago

Thanks Guido!