search

pni-lab / PUMI

PUMI: neuroimaging Pipelines Using Modular workflow Integration
https://pumi.readthedocs.io/en/latest/
GNU General Public License v3.0
1 stars 0 forks source link

Introduce func2func Workflow for Functional-to-sbref Registration #192

Open khoffschlag opened 3 weeks ago

khoffschlag commented 3 weeks ago

Implement a func2func workflow that registers a functional image to the sbref (single-band reference) image. Check HCP (Human Connectome Project) for best practices on registration type (linear vs. non-linear) for functional-to-sbref alignment and integrate this approach within func2func.

Afterward, add the new func2func node to the RCPL/RPN pipeline just before the func2anat workflow. Ensure that the registered functional-to-sbref image output from func2func is passed as the input to func2anat.

khoffschlag commented 3 weeks ago

A useful resource: https://open.win.ox.ac.uk/pages/fslcourse/practicals/registration/index.html

At the end there is some info about the aim of multiband acquisiton and the importance of registration.