issues
search
pocession
/
MicroC
This repository is a code base for MicroC analysis in Musa lab
0
stars
0
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
The output DIR result is ctrl vs treat, not treat vs ctrl
#17
pocession
closed
3 months ago
0
README.md: updates
#16
pocession
closed
3 months ago
0
no need black list
#15
pocession
closed
3 months ago
0
subset_hic.py: changes
#14
pocession
closed
3 months ago
0
Include wider regions aside from IL-1B super TAD
#13
WinsenWijaya
opened
4 months ago
1
Double check R codes
#12
WinsenWijaya
closed
3 months ago
0
upload hic file to figshare and link to ucsc genome browser
#11
pocession
closed
3 months ago
1
IL1 super TAD: compare between bcg and bcg+LDHi, between bcg and beta-glucan etc
#10
pocession
closed
5 months ago
0
Build a genome track for DIR
#9
pocession
closed
5 months ago
0
Make the requirement.txt for python packages
#8
pocession
closed
5 months ago
0
Document for DIR pipeline
#7
pocession
closed
6 months ago
0
Comments for bash
#6
pocession
opened
6 months ago
0
subset_hic_data.py: include functions to generate the start_position_index
#5
pocession
closed
6 months ago
0
annotateDIR(): should annotate both index position
#4
pocession
closed
6 months ago
0
The starting position index should be the two midpoints from two interacted regions
#3
pocession
closed
6 months ago
0
Identification of differentially-interacted regions (DIRs)
#2
pocession
closed
6 months ago
2
Read hic file format
#1
pocession
closed
6 months ago
0