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poldrack / fmri-handbook-2e-code

Code for 2nd edition of fMRI analysis handbook
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haxby blockmodel/stats data #1

Closed jdkent closed 6 years ago

jdkent commented 6 years ago

Hi,

My P.I. @mwvoss found these notebooks and thought they could be a great resource for our upcoming fmri class in the spring. As I'm working through updating the vagrant file, I noticed one piece of data on dropbox isn't there anymore. Is it possible to share that data again?

Thanks! James

poldrack commented 6 years ago

cleaning it up now, will push an updated version later today. @mwvoss may also want to look at https://github.com/poldrack/fmri-analysis-vm which has more recently updated content (though the Vagrantfile has not been updated)

jdkent commented 6 years ago

Thank you! I'll talk with her about fmri-analysis-vm . Word of warning when I tried to update the vagrant file. After I updated the O.S. to xenial, and bumped up matlab and spm versions to download, I starting getting close to the 10 GB limit the vagrant base box has. Apparently vagrant does not lend itself very well towards modifying the size of the box unless you make the base box yourself. I'm potentially thinking of a docker solution where the large size is annoying, but not unmanageable.

poldrack commented 6 years ago

I think moving to docker could be good though it makes it a bit more of a pain for novice users. the main reason I have stuck with Vagrant is that it's nice for novices to have access to the linux GUI.

On Sun, Nov 12, 2017 at 9:59 AM, James Kent notifications@github.com wrote:

Thank you! I'll talk with her about fmri-analysis-vm https://github.com/poldrack/fmri-analysis-vm Word of warning when I tried to update the vagrant file. After I updated the O.S. to xenial, and bumped up matlab, and spm versions to download, I starting getting close to the 10 GB limit the vagrant base box has. Apparently vagrant does not lend itself very well towards modifying the size of the box unless you make the base box yourself. I'm potentially thinking of a docker solution where the large size is annoying, but not unmanageable.

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-- Russell A. Poldrack Albert Ray Lang Professor of Psychology Professor (by courtesy) of Computer Science Bldg. 420, Jordan Hall Stanford University Stanford, CA 94305

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poldrack commented 6 years ago

ok, Vagrantfile has been updated with working download links

jdkent commented 6 years ago

Thanks for updating! I agree, docker would be pain for novice users.