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pombase / website

PomBase website v2
MIT License
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Should we show a product length for pseudogenes? #347

Closed kimrutherford closed 7 years ago

kimrutherford commented 7 years ago

In v2 we show the product length for pseudogenes? Should we? PomBase v1 doesn't show it.

eg. "349 aa" here: http://preview.pombase.org/gene/SPAC212.10

ValWood commented 7 years ago

we also need to review all pseudo genes. https://github.com/pombase/curation/issues/21

If a gene has a single frameshift, it could be an error in the sequence we represent as a frameshift and call it "coding". We should only use pseudogene for things which are really degraded...

ValWood commented 7 years ago

oh this was the comment I put earlier, but fogot to click "comment"

I don't think we should show length or size for pseudo.