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populationgenomics
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automated-interpretation-pipeline
Rare Disease variant prioritisation MVP
MIT License
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ClinVar hyperlinks busted
#389
MattWellie
opened
13 hours ago
0
ClinVar Re-processing Updates
#388
MattWellie
closed
23 hours ago
0
Reduce PanelApp fragility through request retries
#387
MattWellie
closed
1 day ago
0
Potential SV Bug
#386
MattWellie
closed
2 days ago
1
'Local' AIP in Hail
#385
MattWellie
opened
4 days ago
0
Revert all Docker restructuring
#384
MattWellie
closed
5 days ago
1
show_default fix
#383
MattWellie
closed
1 week ago
1
Environment Lock
#382
nevoodoo
closed
1 week ago
0
Make first_seen first seen
#381
cassimons
opened
1 week ago
0
Take Pathogenic SV input from PanelApp
#380
MattWellie
opened
1 week ago
0
Re-work pre commit
#379
MattWellie
closed
1 week ago
0
Change HPO term storage
#378
MattWellie
opened
1 week ago
1
Allow for no categorised variants
#377
MattWellie
closed
2 weeks ago
0
Add projects list[str] into meta
#376
MattWellie
closed
2 weeks ago
0
Re-base image
#375
MattWellie
closed
2 weeks ago
0
Fix failure to export haplo GTs
#374
MattWellie
closed
4 weeks ago
0
Revert base image
#373
MattWellie
closed
1 month ago
0
AIP should permit multiple VCFs
#372
MattWellie
opened
1 month ago
0
Category 6 & Support Changes
#371
MattWellie
closed
1 month ago
0
Proposal: AlphaMissense Ascendant
#370
MattWellie
closed
1 month ago
1
Writes pheno-specific output to a provided path
#369
MattWellie
closed
1 month ago
0
Bases build on a smaller Hail image, instead of the driver image
#368
MattWellie
closed
1 month ago
0
Allow for interchromosomal split variants
#367
MattWellie
closed
1 month ago
1
CTX SV variants break parser
#366
MattWellie
closed
1 month ago
1
Various stability fixes
#365
MattWellie
closed
1 month ago
0
Fix Cat 4 logic, reorganise methods
#364
MattWellie
closed
1 month ago
0
Seqr minimiser produces a second pheno-matched JSON
#363
MattWellie
closed
1 month ago
0
Implement checkpoint resumption
#362
MattWellie
closed
2 months ago
0
Support vars comply with seqr needs
#361
MattWellie
closed
2 months ago
0
Keep full comp-het where only half is new
#360
MattWellie
closed
2 months ago
0
Capture both sides of a Comp-Het if either side is new
#359
MattWellie
closed
2 months ago
0
Update Seqr minimiser script
#358
MattWellie
closed
1 month ago
1
Improve HPO presentation in reports
#357
MattWellie
closed
2 months ago
0
Add plaintext phenotypes to HPO matching
#356
MattWellie
closed
2 months ago
0
New linter. Readme stickers
#355
MattWellie
closed
2 months ago
0
What's going on here
#354
MattWellie
closed
1 month ago
1
What's going on here
#353
MattWellie
closed
1 month ago
0
Generate historic data
#352
MattWellie
closed
2 months ago
0
Model correction
#351
MattWellie
closed
3 months ago
0
Allow ignoring of specific categories via config
#350
MattWellie
closed
3 months ago
0
Disable categories via config
#349
MattWellie
closed
3 months ago
0
Linter changes, fixes scheduled index job
#348
MattWellie
closed
3 months ago
1
Consider a formal schema
#347
MattWellie
closed
4 months ago
0
Make it clear which samples are in which callsets
#346
MattWellie
opened
4 months ago
0
Passes the wrong MT to SV labelling
#345
MattWellie
closed
4 months ago
0
Introducing models
#344
MattWellie
closed
4 months ago
0
Fix Comp-Het test
#343
MattWellie
closed
4 months ago
1
Adjust filters and simplify execution
#342
MattWellie
closed
5 months ago
0
"jvm jobs cannot be on lowmem machines"
#341
MattWellie
closed
5 months ago
0
Update Auth, condense to 1 Docker WF
#340
MattWellie
closed
5 months ago
0
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