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poseidon-framework / poseidon-hs

A toolset to work with modular genotype databases in the Poseidon format
https://poseidon-framework.github.io/#/trident
MIT License
7 stars 2 forks source link

Supervalidate #259

Closed nevrome closed 1 year ago

nevrome commented 1 year ago

This PR extends validate with the option to check not just whole packages, but also individual files (.janno, .bib, etc.). When merged, this closes #248

codecov[bot] commented 1 year ago

Codecov Report

Patch coverage: 53.06% and project coverage change: -0.07% :warning:

Comparison is base (2766004) 69.81% compared to head (1ca14d7) 69.75%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## master #259 +/- ## ========================================== - Coverage 69.81% 69.75% -0.07% ========================================== Files 23 23 Lines 3111 3144 +33 Branches 324 334 +10 ========================================== + Hits 2172 2193 +21 - Misses 615 617 +2 - Partials 324 334 +10 ``` | [Files Changed](https://app.codecov.io/gh/poseidon-framework/poseidon-hs/pull/259?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=poseidon-framework) | Coverage Δ | | |---|---|---| | [src/Poseidon/CLI/Validate.hs](https://app.codecov.io/gh/poseidon-framework/poseidon-hs/pull/259?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=poseidon-framework#diff-c3JjL1Bvc2VpZG9uL0NMSS9WYWxpZGF0ZS5ocw==) | `57.40% <46.51%> (+3.24%)` | :arrow_up: | | [src/Poseidon/Package.hs](https://app.codecov.io/gh/poseidon-framework/poseidon-hs/pull/259?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=poseidon-framework#diff-c3JjL1Bvc2VpZG9uL1BhY2thZ2UuaHM=) | `76.51% <100.00%> (+0.13%)` | :arrow_up: |

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