Is there a functionality to check if the roxygen declarations are corresponding to the functions?

[vertesy]

Hey, thank you for this great package, I use it when I'm writing my own packages.

Is there a functionality to check if the roxygen declarations are corresponding to the functions, in. a long file of many function declarations?

I want to check :

• if all parameters declared in the roxygen documentation are used by the corresponding function and
• if there are any superfluous declarations.

Thank you! Abel

[olivroy]

devtools::check_man()?

[vertesy]

Thank you so much, that works really well!

[vertesy]

On a second thought, after using it:

This function does the job, but not most conveniently. If a package has multiple R scripts, then you have to search through all of them to find where is that function declared and in which lines is the argument declaration missing.

Some of the other devtools functions, like document(), give you a direct clickable link in the console so that you can quickly jump to the problematic section of your code, if I recall correctly. (Unfortunately that does not check for missing argument declarations, only works for empty param declarations @ param _nothing follows_, as far as I know)

ℹ Updating PackageTools documentation
Writing [NAMESPACE](google.com)
ℹ Loading PackageTools
✖ [PackageTools.R:30](google.com): @param requires two parts: an argument name and a description.
Writing NAMESPACE

Alternatively, some functionality that would automatically place just the empty arguments @param missin wherever it's not declared would be also quite convenient.

If anyone knows about such, please let me know. Thank you.

[vertesy]

Also, I spent 2+ hours to make devtools::check_man() work for one of my packages, Seurat.utils.

> devtools::check_man("~/GitHub/Packages/Seurat.utils")
ℹ Updating Seurat.utils documentation
ℹ Loading Seurat.utils
ℹ Checking documentation...
Error in gzfile(file, "rb") : cannot open the connection
> rlang::last_trace()
<error/rlang_error>
Error in `package_file()`:
! /GitHub/Packages/Seurat.utils is not a directory.
---
Backtrace:
    ▆
 1. └─devtools::check_man("/GitHub/Packages/Seurat.utils")
 2.   └─devtools::as.package(pkg)
 3.     └─devtools::package_file(path = x)
Run rlang::last_trace(drop = FALSE) to see 2 hidden frames.

Admittedly, the package is not in the best shape, but that's exactly why I need a robust helper tool for.