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rachelss / treecall

Tree-based joint lineage inference and somatic mutation calling
GNU General Public License v2.0
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Add flags to specify which trees to start with #1

Open rachelss opened 8 years ago

rachelss commented 8 years ago

Currently treecall nbjoin starts with (1) nj tree (from raw data) (2) top down partitioning tree (3) tree where a sample is selected as the outgroup and the polytomies are resolved randomly - for all samples

Need to add flags to pick one or more options