ralvarezpa / gap-analysis-cwr

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Generate priority taxa lists for nonpriority crops #119

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago
in taxonomic database, query for all closely related taxa (Gene pools 1-2, 
primary, secondary, Taxon Groups 1-3) plus all taxa confirmed or potential use 
value, for all 52 crop gene pools listed (in green column G in sheet 
CWR_project_additionalcrops) in google doc CWR_project_crops.  list taxa by 
crop genepool.  

example: 
crop_genepool   concept         taxon
Allium cepa primary         Allium vavilovii
Allium cepa secondary   Allium galanthum
Allium cepa secondary   Allium roylei
Allium cepa potential   Allium fistulosum
Allium cepa confirmed   Allium fistulosum
Allium cepa confirmed   Allium roylei

This list forms the species we will perform gap analysis on for our approx. 50 
non priority crops.  We will use this list now to help us identify which taxa 
are important to focus on for taxonomic corrections.  We will need to correct 
the final taxonomy for these 34 genera:
Allium
Ananas
Arachis
Artocarpus
Beta
Brassica
Camellia
Capsicum
Carica
Chenopodium
Citrullus
Citrus
Coffea
Cucumis
Cucurbita
Digitaria
Dioscorea
Fragaria
Glycine
Gossypium
Mangifera
Manihot
Panicum
Persea
Phoenix
Prunus
Pyrus
Saccharum
Setaria
Solanum
Theobroma
Vigna
Vitis
Zea

Original issue reported on code.google.com by colin.kh...@gmail.com on 7 Feb 2013 at 8:29

GoogleCodeExporter commented 9 years ago

Original comment by alexgcv@gmail.com on 8 Feb 2013 at 7:08

GoogleCodeExporter commented 9 years ago

Original comment by colin.kh...@gmail.com on 27 Feb 2013 at 6:47