rDiff example data is not available on cbio.mskcc.org website

[martinjvickers]

The example data is no longer available on the website.

wget -c http://cbio.mskcc.org/public/raetschlab/user/drewe/rdiff/example_data.tar.gz
--2017-11-07 12:07:08--  http://cbio.mskcc.org/public/raetschlab/user/drewe/rdiff/example_data.tar.gz
Resolving cbio.mskcc.org (cbio.mskcc.org)... 140.163.254.35
Connecting to cbio.mskcc.org (cbio.mskcc.org)|140.163.254.35|:80... connected.
HTTP request sent, awaiting response... 404 Not Found
2017-11-07 12:07:08 ERROR 404: Not Found.

[AlexWeinreb]

In ./examples/get_data.sh, you want to change line 23 from:

wget -c http://cbio.mskcc.org/public/raetschlab/user/drewe/rdiff/example_data.tar.gz

to:

wget -c https://public.bmi.inf.ethz.ch/user/drewe/rdiff/data/example_data.tar.gz

The correct links are available on the website in the "publication" tab, but doesn't list all the files needed.

[philippdre]

Done.

Thx for letting me know that the paths were outdated.

Best regards, Philipp

On 17 Jun 2020, at 23:53, AlexWeinreb notifications@github.com wrote:

In ./examples/get_data.sh, you want to change line 23 from:

wget -c http://cbio.mskcc.org/public/raetschlab/user/drewe/rdiff/example_data.tar.gz to:

wget -c https://public.bmi.inf.ethz.ch/user/drewe/rdiff/data/example_data.tar.gz The correct links are available on the website in the "publication" tab, but doesn't list all the files needed.

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[martinjvickers]

Fixed in; https://github.com/ratschlab/rDiff/blob/90fa6cb643a22145f6e06555b2626a2ce14ab111/examples/get_data.sh#L23