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reactome / ReactomeGSA

R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis
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sparse->dense coercion: allocating vector of size 17.3 GiB #84

Open XjtuZhangKun-lab opened 2 months ago

XjtuZhangKun-lab commented 2 months ago

在进行单细胞分析时，我遇到了以下情况 reactome_obj <- analyse_sc_clusters(temp,create_reactome_visualization=T,Verbose= TRUE) Converting expression data to string... (This may take a moment) Conversion complete Compressing request data... Reactome Analysis submitted succesfully Warning message: In asMethod(object) : sparse->dense coercion: allocating vector of size 17.3 GiB

reactome_obj NULL path_ways <- pathways(reactome_obj) Error in (function (classes, fdef, mtable) : 函数‘pathways’标签‘"NULL"’找不到继承方法