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richelbilderbeek
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razzo
Research project by Giovanni Laudanno and Richel J.C. Bilderbeek
GNU General Public License v3.0
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add coarsegrain to nltts
#401
Giappo
closed
4 years ago
0
new info added in collect_all_data
#400
Giappo
closed
4 years ago
0
Giovanni
#399
Giappo
closed
4 years ago
0
kl
#398
Giappo
closed
4 years ago
0
Create CODE_OF_CONDUCT.md
#397
richelbilderbeek
closed
4 years ago
0
Giovanni
#396
Giappo
closed
4 years ago
0
push on master YOLO
#395
Giappo
closed
4 years ago
0
Send data again, so I can reproduce the figure
#394
Giappo
closed
4 years ago
1
Develop
#393
Giappo
closed
4 years ago
0
Add pirouette example: the effect of MCMC chain length on ESS
#392
richelbilderbeek
closed
4 years ago
1
Just do the full runs [RE-RUNNING FAILED RUNS]
#391
richelbilderbeek
closed
4 years ago
15
Why: longer chain length, lower ESS?
#390
richelbilderbeek
closed
4 years ago
1
Modify 'razzo_project/scripts/99_zip.sh' to also zip 'parameters.RDa' files
#389
richelbilderbeek
closed
4 years ago
1
Do https://github.com/richelbilderbeek/pirouette/issues/378
#388
richelbilderbeek
closed
4 years ago
2
Giovanni
#387
Giappo
closed
4 years ago
0
Develop
#386
Giappo
closed
4 years ago
0
collect_esses must ignore ESSes of marginal likelihood estimations
#385
richelbilderbeek
closed
4 years ago
10
Fix pilot runs [MAYBE DONE]
#384
richelbilderbeek
closed
4 years ago
9
Use Jensen-Shannon divergence between true and twin tree?
#383
richelbilderbeek
closed
4 years ago
4
Use babette from CRAN
#382
richelbilderbeek
closed
4 years ago
1
Measure required time for strongest mbdness parsettings. 20200128
#381
Giappo
opened
4 years ago
11
Need to redo the 'collect_' functions, as these may have given incorrect results
#380
richelbilderbeek
closed
4 years ago
1
Add raztr repo
#379
richelbilderbeek
closed
4 years ago
2
Regenerate data
#378
richelbilderbeek
closed
4 years ago
2
Use tagged versions for razzo experiment
#377
richelbilderbeek
closed
4 years ago
3
Evidence files must be created in the right folder
#376
richelbilderbeek
closed
4 years ago
1
Regen example data
#375
richelbilderbeek
closed
4 years ago
4
'pirouette::est_evidences' should use filenames in MCMC
#374
richelbilderbeek
closed
4 years ago
1
Check select_candidate_evidences
#373
richelbilderbeek
closed
4 years ago
1
Put pirouette manuscript on BioRxiv
#372
richelbilderbeek
closed
4 years ago
1
Get test run to work again
#371
richelbilderbeek
closed
4 years ago
16
Decide: DNA sequence length: 1000 or 5000?
#370
richelbilderbeek
closed
4 years ago
4
Gather info: Proportion invariant in DNA: 0.0, 0.5 or estimate?
#369
richelbilderbeek
closed
4 years ago
7
Fix build, fix #366
#368
Giappo
closed
4 years ago
0
Do a full run with the Giappo params, 20200126
#367
richelbilderbeek
closed
4 years ago
6
Fix develop branch
#366
richelbilderbeek
closed
4 years ago
1
Develop
#365
Giappo
closed
4 years ago
0
Show detailed testthat log on Travis
#364
richelbilderbeek
closed
4 years ago
1
Develop
#363
Giappo
closed
4 years ago
0
Giovanni
#362
Giappo
closed
4 years ago
0
Develop
#361
Giappo
closed
4 years ago
0
Process feedback pirouette manuscript
#360
richelbilderbeek
closed
4 years ago
5
Develop
#359
Giappo
closed
4 years ago
0
Vote for pirouette logo
#358
richelbilderbeek
closed
4 years ago
2
Update beautier and beastier to provide for correct MCMC lengths
#357
richelbilderbeek
closed
4 years ago
1
Develop
#356
Giappo
closed
4 years ago
0
Determine n_replicates for n_params_max
#355
richelbilderbeek
opened
4 years ago
4
Add runtime to detailed overview
#354
richelbilderbeek
closed
4 years ago
2
Give last info for presentation
#353
richelbilderbeek
closed
4 years ago
8
Check validity of our current conclusions
#352
richelbilderbeek
closed
4 years ago
1
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