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rnajena
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poseidon
PoSeiDon: positive selection detection and recombination analysis pipeline
MIT License
35
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10
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add SGE profile, closes #35
#36
fischer-hub
opened
2 years ago
0
Installing and running through singularity
#35
rresendepinto
opened
2 years ago
29
GARD_detect HPC issues, closes #31
#34
fischer-hub
opened
2 years ago
2
fasta check says illegal characters
#33
mchaisso
opened
2 years ago
4
Simple summary of genomes with positive selection
#32
mchaisso
closed
2 years ago
3
GARD process fails if temp dir path for MPI is too long
#31
fischer-hub
opened
2 years ago
3
GARD fails due to MPI setup (?)
#30
Shellfishgene
opened
2 years ago
7
Error running test files
#29
koushik1989
closed
2 years ago
2
bump nf version check
#28
hoelzer
closed
3 years ago
0
Run poseidon with mitochondrial sequences
#27
pedronachtigall
opened
3 years ago
2
Profile selection in conda environment
#26
burcudsr
opened
3 years ago
3
Process killed at FASTA format check, no error msg
#25
DrPintoThe2nd
closed
3 years ago
2
improved error handling GARD
#24
hoelzer
closed
3 years ago
0
Visualization of alignment and positively selected sites
#23
hoelzer
opened
3 years ago
0
update readme
#22
hoelzer
closed
4 years ago
0
Nextflow
#21
hoelzer
closed
4 years ago
0
add fasta name to terminal print
#20
hoelzer
closed
4 years ago
0
add fasta name to terminal print
#19
hoelzer
closed
4 years ago
0
Nextflow
#18
hoelzer
closed
4 years ago
0
Error handling
#17
hoelzer
closed
4 years ago
0
SARS-CoV-2 small example
#16
hoelzer
closed
4 years ago
0
Nextflow
#15
hoelzer
closed
4 years ago
0
Rename/Restore FASTA IDs
#14
hoelzer
opened
4 years ago
0
Last fragment is incorrectly marked as in-significant
#13
hoelzer
opened
4 years ago
0
GARD deactivation
#12
hoelzer
opened
4 years ago
0
User-friendly error messages
#11
hoelzer
opened
4 years ago
1
Max cores
#10
hoelzer
closed
4 years ago
0
Chlamydia test data: fragment color bars are not correct
#9
hoelzer
opened
4 years ago
0
Nextflow
#8
hoelzer
closed
4 years ago
0
Nextflow
#7
hoelzer
closed
4 years ago
0
publish output, on complete mssg
#6
hoelzer
closed
4 years ago
0
Nextflow
#5
hoelzer
closed
4 years ago
0
Nextflow
#4
hoelzer
closed
4 years ago
0
Check initial file input
#3
hoelzer
opened
4 years ago
0
Nextflow
#2
hoelzer
closed
4 years ago
0
Nextflow implementation
#1
hoelzer
closed
4 years ago
0