ropensci / phylotaR

An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
https://docs.ropensci.org/phylotaR
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Dependency 'treeman' has been archived: #45

Closed jeroen closed 2 years ago

jeroen commented 4 years ago

https://cran.r-project.org/web/packages/phylotaR/index.html

nylander commented 4 years ago

Should of course be taken care of. Meanwhile, this seems to work (on R 3.4.4, Linux):

library(devtools)
devtools::install_github('dombennett/treeman')
devtools::install_github(repo='ropensci/phylotaR', build_vignettes=TRUE)
jeroen commented 4 years ago

This is still unavailable. I know you can make it work with install_github, however we cannot build binary packages for phylotaR if there are hard dependencies that are not in ropensci or cran.

Would it be an option to move treeman to suggests?

DomBennett commented 4 years ago

Hmmm... I think there's some core functionality that depends on treeman.

Currently, re-doubling my efforts to get treeman back on CRAN.