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ropensci / phylotaR

An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
https://docs.ropensci.org/phylotaR
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No need for restez_connect() #62

Closed joelnitta closed 1 year ago

joelnitta commented 1 year ago

As of restez v2.1.0, there is no need for the user to call restez_connect(). Making unnecessary connections to the database can cause warnings or errors, so this should be avoided.

That means lines like this:

https://github.com/ropensci/phylotaR/blob/861fa662e3b97114de7758a825750c489dc13eb3/R/stage2.R#L24-L25

can (and should) be safely deleted.

ShixiangWang commented 1 year ago

@joelnitta Thanks :)