I have a question concerning the installation of tabulizer on Linux. rJava is successfully installed and loaded but the installation of tabulizer then fails with the following error message.
## installation fails
install.packages("tabulizer")
Installing package into ‘/home/yann/R/x86_64-pc-linux-gnu-library/3.6’
(as ‘lib’ is unspecified)
trying URL 'https://cloud.r-project.org/src/contrib/tabulizer_0.2.2.tar.gz'
Content type 'application/x-gzip' length 1047758 bytes (1023 KB)
==================================================
downloaded 1023 KB
* installing *source* package ‘tabulizer’ ...
** package ‘tabulizer’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/home/yann/R/x86_64-pc-linux-gnu-library/3.6/png/libs/png.so':
libpng12.so.0: cannot open shared object file: No such file or directory
Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘tabulizer’
* removing ‘/home/yann/R/x86_64-pc-linux-gnu-library/3.6/tabulizer’
Warning in install.packages :
installation of package ‘tabulizer’ had non-zero exit status
The downloaded source packages are in
‘/tmp/Rtmpf5HpgM/downloaded_packages’
## session info
R version 3.6.3 (2020-02-29)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Linux Mint 20.1
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0
LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=de_CH.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=de_CH.UTF-8 LC_MESSAGES=en_US.UTF-8 LC_PAPER=de_CH.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=de_CH.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] forcats_0.5.0 stringr_1.4.0 dplyr_1.0.3 purrr_0.3.4 tidyr_1.1.2 tibble_3.0.5 ggplot2_3.3.3
[8] tidyverse_1.3.0 readr_1.4.0 lubridate_1.7.9.2 janitor_2.1.0
loaded via a namespace (and not attached):
[1] tinytex_0.29 tidyselect_1.1.0 xfun_0.20 haven_2.3.1 snakecase_0.11.0 colorspace_2.0-0 vctrs_0.3.6
[8] generics_0.1.0 htmltools_0.5.1.1 yaml_2.2.1 rlang_0.4.10 pillar_1.4.7 withr_2.4.1 glue_1.4.2
[15] DBI_1.1.1 dbplyr_2.0.0 modelr_0.1.8 readxl_1.3.1 lifecycle_0.2.0 munsell_0.5.0 gtable_0.3.0
[22] cellranger_1.1.0 rvest_0.3.6 evaluate_0.14 labeling_0.4.2 knitr_1.30 fansi_0.4.2 broom_0.7.3
[29] Rcpp_1.0.6 backports_1.2.1 scales_1.1.1 jsonlite_1.7.2 farver_2.0.3 fs_1.5.0 hms_1.0.0
[36] digest_0.6.27 stringi_1.5.3 grid_3.6.3 cli_2.2.0 tools_3.6.3 magrittr_2.0.1 crayon_1.3.4
[43] pkgconfig_2.0.3 ellipsis_0.3.1 xml2_1.3.2 reprex_1.0.0 assertthat_0.2.1 rmarkdown_2.6 httr_1.4.2
[50] rstudioapi_0.13 R6_2.5.0 compiler_3.6.3
From what I understood Linux Mint doesn't include libpng12 anymore because it is deprecated. I could of course still install it as mentioned on https://www.linuxuprising.com/2018/05/fix-libpng12-0-missing-in-ubuntu-1804.html but I was wondering if it would be possible and worth it to fix this in tabulizer maybe by rebuilding tabulizer with libpng16 instead of libpng12?
I have a question concerning the installation of tabulizer on Linux. rJava is successfully installed and loaded but the installation of tabulizer then fails with the following error message.
From what I understood Linux Mint doesn't include libpng12 anymore because it is deprecated. I could of course still install it as mentioned on https://www.linuxuprising.com/2018/05/fix-libpng12-0-missing-in-ubuntu-1804.html but I was wondering if it would be possible and worth it to fix this in tabulizer maybe by rebuilding tabulizer with libpng16 instead of libpng12?