Convert PAR/REC to Nifti

rordenlab / MRIcroGL

v1.2 GLSL volume rendering. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.

https://www.nitrc.org/plugins/mwiki/index.php/mricrogl:MainPage

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Convert PAR/REC to Nifti #19

Closed SiriusHou closed 3 years ago

SiriusHou commented 3 years ago

I downloaded MRIcroGL 2-Novemember from https://www.nitrc.org/projects/mricrogl to convert PAR/REC file into Nifti format. Now, I got stuck with a problem. When I tried to convert a PAR/REC file into Nifti format, the MRIcroGL doesn't work. The error message is as below.

However, if I modify the diffusion (ap, fh, rl) parameter in image information session from (0.000, 0.000, -1.000) to (0.000001, 0.000, -1.000), MRIcroGL could convert the data into Nifti format. Can you help me fix the problem?

neurolabusc commented 3 years ago

See my comments for dcm2niix issue 461. If you can share an image via GoogleDrive/Box/etc (send link to email in my avatar) I can provide feedback. Otherwise, feel free to modify the dcm2niix code and generate a pull request. I do not have access to Philips equipment, so my support for this format is limited.

SiriusHou commented 3 years ago

Thank you for your rapid reply. I will try your suggestion to see if I can work around. Thanks a lot!

neurolabusc commented 3 years ago

@SiriusHou I have moved this issue to dcm2niix. Can you download the latest build from AppVeyor and see if replacing the copy of dcm2niix in you \MRIcroGL\Resources folder with the latest commit resolves your issue? Thanks!

SiriusHou commented 3 years ago

The problem is fixed! Thank you!