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pip rust libc.so.6 error Centos #104222

Closed putout closed 1 year ago

putout commented 1 year ago

hey OS: Centos 6

installed pip success

Installed Rust manually - success

curl https://sh.rustup.rs | sh
pip install cryptography 

     /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc)
      /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.17' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc)
      /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/lib/librustc_driver-a21dfa8672cc0cdd.so)
      /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/lib/libstd-05737cf45bd30456.so)
      /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.15' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/lib/libstd-05737cf45bd30456.so)
      /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/lib/libLLVM-15-rust-1.65.0-stable.so)
      /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.15' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/lib/libLLVM-15-rust-1.65.0-stable.so)

which led me to

Followed: this for the lib.so error https://stackoverflow.com/a/50697155

also used it as a template for lib 2.17 and 2.15, reloaded the library paths as well

export LD_LIBRARY_PATH=/opt/glibc-2.17/lib  #did the same 2.14 and 2.15

LD_LIBRARY_PATH=/opt/glibc-2.17/lib   #did the same 2.14 and 2.15
source /etc/environment   #did the same each time for 2.14 and 2.15 after i entered the above commands 

rustc
rustc: error while loading shared libraries: __vdso_time: invalid mode for dlopen(): Invalid argument

If I run yum I get the same command as above, but not if I open a new SSH session.

Once I open a new SSH session yum works without that error but rustc command goes back to my initial error. Even though I reloaded the Env and library.

# rustc
/root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc)
/root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.17' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc)
/root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/lib/librustc_driver-a21dfa8672cc0cdd.so)
/root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/lib/libstd-05737cf45bd30456.so)
/root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.15' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/lib/libstd-05737cf45bd30456.so)
/root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/lib/libLLVM-15-rust-1.65.0-stable.so)
/root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/bin/rustc: /lib64/libc.so.6: version `GLIBC_2.15' not found (required by /root/.rustup/toolchains/stable-x86_64-unknown-linux-gnu/lib/libLLVM-15-rust-1.65.0-stable.so)

env output

TERM=xterm
SHELL=/bin/bash
HISTSIZE=10000
QTDIR=/usr/lib64/qt-3.3
QTINC=/usr/lib64/qt-3.3/include
SSH_TTY=/dev/pts/0
USER=root
LS_COLORS=rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.tbz=01;31:*.tbz2=01;31:*.bz=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=01;36:*.au=01;36:*.flac=01;36:*.mid=01;36:*.midi=01;36:*.mka=01;36:*.mp3=01;36:*.mpc=01;36:*.ogg=01;36:*.ra=01;36:*.wav=01;36:*.axa=01;36:*.oga=01;36:*.spx=01;36:*.xspf=01;36:
MAIL=/var/spool/mail/root
PATH=/root/.cargo/bin:/usr/lib64/qt-3.3/bin:/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin
PWD=/root
LANG=en_US.UTF-8
SSH_ASKPASS=/usr/libexec/openssh/gnome-ssh-askpass
HISTCONTROL=ignoredups
SHLVL=1
HOME=/root
LOGNAME=root
QTLIB=/usr/lib64/qt-3.3/lib
CVS_RSH=ssh
LESSOPEN=||/usr/bin/lesspipe.sh %s
G_BROKEN_FILENAMES=1
_=/bin/env

installing rust via pip install rust

 pip install rust
Collecting rust
  Using cached RUST-0.1.1.tar.gz (13 kB)
  Preparing metadata (setup.py) ... done
Collecting matplotlib
  Using cached matplotlib-3.6.2.tar.gz (35.8 MB)
  Preparing metadata (setup.py) ... error
  error: subprocess-exited-with-error

  × python setup.py egg_info did not run successfully.
  │ exit code: 1
  ╰─> [305 lines of output]
      /usr/local/lib/python3.9/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
        warnings.warn(
        error: subprocess-exited-with-error

        × Building wheel for numpy (pyproject.toml) did not run successfully.
        │ exit code: 1
        ╰─> [252 lines of output]
            Running from numpy source directory.
            setup.py:86: DeprecationWarning:

              `numpy.distutils` is deprecated since NumPy 1.23.0, as a result
              of the deprecation of `distutils` itself. It will be removed for
              Python >= 3.12. For older Python versions it will remain present.
              It is recommended to use `setuptools < 60.0` for those Python versions.
              For more details, see:
                https://numpy.org/devdocs/reference/distutils_status_migration.html

              import numpy.distutils.command.sdist
            Processing numpy/random/_bounded_integers.pxd.in
            Processing numpy/random/_generator.pyx
            Processing numpy/random/mtrand.pyx
            Processing numpy/random/_philox.pyx
            Processing numpy/random/_pcg64.pyx
            Processing numpy/random/bit_generator.pyx
            Processing numpy/random/_mt19937.pyx
            Processing numpy/random/_common.pyx
            Processing numpy/random/_sfc64.pyx
            Processing numpy/random/_bounded_integers.pyx.in
            Cythonizing sources
            INFO: blas_opt_info:
            INFO: blas_armpl_info:
            INFO: customize UnixCCompiler
            INFO:   libraries armpl_lp64_mp not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            INFO: blas_mkl_info:
            INFO:   libraries mkl_rt not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            INFO: blis_info:
            INFO:   libraries blis not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            INFO: openblas_info:
            INFO:   libraries openblas not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            INFO: accelerate_info:
            INFO:   NOT AVAILABLE
            INFO:
            INFO: atlas_3_10_blas_threads_info:
            INFO: Setting PTATLAS=ATLAS
            INFO:   libraries tatlas not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64/atlas', '/usr/lib64/sse2', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            INFO: atlas_3_10_blas_info:
            INFO:   libraries satlas not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64/atlas', '/usr/lib64/sse2', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            INFO: atlas_blas_threads_info:
            INFO: Setting PTATLAS=ATLAS
            INFO:   libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64/atlas', '/usr/lib64/sse2', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            INFO: atlas_blas_info:
            INFO:   libraries f77blas,cblas,atlas not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64/atlas', '/usr/lib64/sse2', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            /tmp/pip-wheel-01aypt6f/numpy_08a06db0fbe249348e0b9967115c6334/numpy/distutils/system_info.py:2077: UserWarning:
                Optimized (vendor) Blas libraries are not found.
                Falls back to netlib Blas library which has worse performance.
                A better performance should be easily gained by switching
                Blas library.
              if self._calc_info(blas):
            INFO: blas_info:
            INFO:   libraries blas not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            /tmp/pip-wheel-01aypt6f/numpy_08a06db0fbe249348e0b9967115c6334/numpy/distutils/system_info.py:2077: UserWarning:
                Blas (http://www.netlib.org/blas/) libraries not found.
                Directories to search for the libraries can be specified in the
                numpy/distutils/site.cfg file (section [blas]) or by setting
                the BLAS environment variable.
              if self._calc_info(blas):
            INFO: blas_src_info:
            INFO:   NOT AVAILABLE
            INFO:
            /tmp/pip-wheel-01aypt6f/numpy_08a06db0fbe249348e0b9967115c6334/numpy/distutils/system_info.py:2077: UserWarning:
                Blas (http://www.netlib.org/blas/) sources not found.
                Directories to search for the sources can be specified in the
                numpy/distutils/site.cfg file (section [blas_src]) or by setting
                the BLAS_SRC environment variable.
              if self._calc_info(blas):
            INFO:   NOT AVAILABLE
            INFO:
            non-existing path in 'numpy/distutils': 'site.cfg'
            INFO: lapack_opt_info:
            INFO: lapack_armpl_info:
            INFO:   libraries armpl_lp64_mp not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            INFO: lapack_mkl_info:
            INFO:   libraries mkl_rt not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            INFO: openblas_lapack_info:
            INFO:   libraries openblas not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            INFO: openblas_clapack_info:
            INFO:   libraries openblas,lapack not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            INFO: flame_info:
            INFO:   libraries flame not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            INFO: atlas_3_10_threads_info:
            INFO: Setting PTATLAS=ATLAS
            INFO:   libraries tatlas,tatlas not found in /usr/local/lib64
            INFO:   libraries tatlas,tatlas not found in /usr/local/lib
            INFO:   libraries tatlas,tatlas not found in /usr/lib64/atlas
            INFO:   libraries tatlas,tatlas not found in /usr/lib64/sse2
            INFO:   libraries tatlas,tatlas not found in /usr/lib64
            INFO:   libraries tatlas,tatlas not found in /usr/lib
            INFO: <class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
            INFO:   NOT AVAILABLE
            INFO:
            INFO: atlas_3_10_info:
            INFO:   libraries satlas,satlas not found in /usr/local/lib64
            INFO:   libraries satlas,satlas not found in /usr/local/lib
            INFO:   libraries satlas,satlas not found in /usr/lib64/atlas
            INFO:   libraries satlas,satlas not found in /usr/lib64/sse2
            INFO:   libraries satlas,satlas not found in /usr/lib64
            INFO:   libraries satlas,satlas not found in /usr/lib
            INFO: <class 'numpy.distutils.system_info.atlas_3_10_info'>
            INFO:   NOT AVAILABLE
            INFO:
            INFO: atlas_threads_info:
            INFO: Setting PTATLAS=ATLAS
            INFO:   libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib64
            INFO:   libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
            INFO:   libraries ptf77blas,ptcblas,atlas not found in /usr/lib64/atlas
            INFO:   libraries ptf77blas,ptcblas,atlas not found in /usr/lib64/sse2
            INFO:   libraries ptf77blas,ptcblas,atlas not found in /usr/lib64
            INFO:   libraries ptf77blas,ptcblas,atlas not found in /usr/lib
            INFO: <class 'numpy.distutils.system_info.atlas_threads_info'>
            INFO:   NOT AVAILABLE
            INFO:
            INFO: atlas_info:
            INFO:   libraries f77blas,cblas,atlas not found in /usr/local/lib64
            INFO:   libraries f77blas,cblas,atlas not found in /usr/local/lib
            INFO:   libraries f77blas,cblas,atlas not found in /usr/lib64/atlas
            INFO:   libraries f77blas,cblas,atlas not found in /usr/lib64/sse2
            INFO:   libraries f77blas,cblas,atlas not found in /usr/lib64
            INFO:   libraries f77blas,cblas,atlas not found in /usr/lib
            INFO: <class 'numpy.distutils.system_info.atlas_info'>
            INFO:   NOT AVAILABLE
            INFO:
            INFO: lapack_info:
            INFO:   libraries lapack not found in ['/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
            INFO:   NOT AVAILABLE
            INFO:
            /tmp/pip-wheel-01aypt6f/numpy_08a06db0fbe249348e0b9967115c6334/numpy/distutils/system_info.py:1902: UserWarning:
                Lapack (http://www.netlib.org/lapack/) libraries not found.
                Directories to search for the libraries can be specified in the
                numpy/distutils/site.cfg file (section [lapack]) or by setting
                the LAPACK environment variable.
              return getattr(self, '_calc_info_{}'.format(name))()
            INFO: lapack_src_info:
            INFO:   NOT AVAILABLE
            INFO:
            /tmp/pip-wheel-01aypt6f/numpy_08a06db0fbe249348e0b9967115c6334/numpy/distutils/system_info.py:1902: UserWarning:
                Lapack (http://www.netlib.org/lapack/) sources not found.
                Directories to search for the sources can be specified in the
                numpy/distutils/site.cfg file (section [lapack_src]) or by setting
                the LAPACK_SRC environment variable.
              return getattr(self, '_calc_info_{}'.format(name))()
            INFO:   NOT AVAILABLE
            INFO:
            INFO: numpy_linalg_lapack_lite:
            INFO:   FOUND:
            INFO:     language = c
            INFO:     define_macros = [('HAVE_BLAS_ILP64', None), ('BLAS_SYMBOL_SUFFIX', '64_')]
            INFO:
            Warning: attempted relative import with no known parent package
            /tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py:275: UserWarning: Unknown distribution option: 'define_macros'
              warnings.warn(msg)
            running bdist_wheel
            running build
            running config_cc
            INFO: unifing config_cc, config, build_clib, build_ext, build commands --compiler options
            running config_fc
            INFO: unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
            running build_src
            INFO: build_src
            INFO: building py_modules sources
            creating build
            creating build/src.linux-x86_64-3.9
            creating build/src.linux-x86_64-3.9/numpy
            creating build/src.linux-x86_64-3.9/numpy/distutils
            INFO: building library "npymath" sources
            WARN: Could not locate executable armflang
            cc1plus: error: unrecognized command line option "-std=c++11"
            Traceback (most recent call last):
              File "/usr/local/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 351, in <module>
                main()
              File "/usr/local/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 333, in main
                json_out['return_val'] = hook(**hook_input['kwargs'])
              File "/usr/local/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 249, in build_wheel
                return _build_backend().build_wheel(wheel_directory, config_settings,
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/build_meta.py", line 230, in build_wheel
                return self._build_with_temp_dir(['bdist_wheel'], '.whl',
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/build_meta.py", line 215, in _build_with_temp_dir
                self.run_setup()
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/build_meta.py", line 267, in run_setup
                super(_BuildMetaLegacyBackend,
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/build_meta.py", line 158, in run_setup
                exec(compile(code, __file__, 'exec'), locals())
              File "setup.py", line 494, in <module>
                setup_package()
              File "setup.py", line 486, in setup_package
                setup(**metadata)
              File "/tmp/pip-wheel-01aypt6f/numpy_08a06db0fbe249348e0b9967115c6334/numpy/distutils/core.py", line 169, in setup
                return old_setup(**new_attr)
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/__init__.py", line 153, in setup
                return distutils.core.setup(**attrs)
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/_distutils/core.py", line 148, in setup
                dist.run_commands()
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 967, in run_commands
                self.run_command(cmd)
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 986, in run_command
                cmd_obj.run()
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/wheel/bdist_wheel.py", line 299, in run
                self.run_command('build')
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/_distutils/cmd.py", line 313, in run_command
                self.distribution.run_command(command)
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 986, in run_command
                cmd_obj.run()
              File "/tmp/pip-wheel-01aypt6f/numpy_08a06db0fbe249348e0b9967115c6334/numpy/distutils/command/build.py", line 62, in run
                old_build.run(self)
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/_distutils/command/build.py", line 135, in run
                self.run_command(cmd_name)
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/_distutils/cmd.py", line 313, in run_command
                self.distribution.run_command(command)
              File "/tmp/pip-build-env-38751wlx/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 986, in run_command
                cmd_obj.run()
              File "/tmp/pip-wheel-01aypt6f/numpy_08a06db0fbe249348e0b9967115c6334/numpy/distutils/command/build_src.py", line 144, in run
                self.build_sources()
              File "/tmp/pip-wheel-01aypt6f/numpy_08a06db0fbe249348e0b9967115c6334/numpy/distutils/command/build_src.py", line 155, in build_sources
                self.build_library_sources(*libname_info)
              File "/tmp/pip-wheel-01aypt6f/numpy_08a06db0fbe249348e0b9967115c6334/numpy/distutils/command/build_src.py", line 288, in build_library_sources
                sources = self.generate_sources(sources, (lib_name, build_info))
              File "/tmp/pip-wheel-01aypt6f/numpy_08a06db0fbe249348e0b9967115c6334/numpy/distutils/command/build_src.py", line 378, in generate_sources
                source = func(extension, build_dir)
              File "numpy/core/setup.py", line 758, in get_mathlib_info
                raise RuntimeError(
            RuntimeError: Broken toolchain: cannot link a simple C++ program. note: A compiler with support for C++11 language features is required.
            [end of output]

        note: This error originates from a subprocess, and is likely not a problem with pip.
        ERROR: Failed building wheel for numpy
      ERROR: Failed to build one or more wheels
      Traceback (most recent call last):
        File "/usr/local/lib/python3.9/site-packages/setuptools/installer.py", line 82, in fetch_build_egg
          subprocess.check_call(cmd)
        File "/usr/local/lib/python3.9/subprocess.py", line 373, in check_call
          raise CalledProcessError(retcode, cmd)
      subprocess.CalledProcessError: Command '['/usr/local/bin/python3.9', '-m', 'pip', '--disable-pip-version-check', 'wheel', '--no-deps', '-w', '/tmp/tmpaez0pl2r', '--quiet', 'numpy>=1.19']' returned non-zero exit status 1.

      The above exception was the direct cause of the following exception:

      Traceback (most recent call last):
        File "<string>", line 2, in <module>
        File "<pip-setuptools-caller>", line 34, in <module>
        File "/tmp/pip-install-6p91igh6/matplotlib_b364f2b39009494d9fd88d7e379ca6ef/setup.py", line 260, in <module>
          setup(  # Finally, pass this all along to setuptools to do the heavy lifting.
        File "/usr/local/lib/python3.9/site-packages/setuptools/__init__.py", line 86, in setup
          _install_setup_requires(attrs)
        File "/usr/local/lib/python3.9/site-packages/setuptools/__init__.py", line 80, in _install_setup_requires
          dist.fetch_build_eggs(dist.setup_requires)
        File "/usr/local/lib/python3.9/site-packages/setuptools/dist.py", line 875, in fetch_build_eggs
          resolved_dists = pkg_resources.working_set.resolve(
        File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 789, in resolve
          dist = best[req.key] = env.best_match(
        File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 1075, in best_match
          return self.obtain(req, installer)
        File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py", line 1087, in obtain
          return installer(requirement)
        File "/usr/local/lib/python3.9/site-packages/setuptools/dist.py", line 945, in fetch_build_egg
          return fetch_build_egg(self, req)
        File "/usr/local/lib/python3.9/site-packages/setuptools/installer.py", line 84, in fetch_build_egg
          raise DistutilsError(str(e)) from e
      distutils.errors.DistutilsError: Command '['/usr/local/bin/python3.9', '-m', 'pip', '--disable-pip-version-check', 'wheel', '--no-deps', '-w', '/tmp/tmpaez0pl2r', '--quiet', 'numpy>=1.19']' returned non-zero exit status 1.

      Edit mplsetup.cfg to change the build options; suppress output with --quiet.

      BUILDING MATPLOTLIB
            python: yes [3.9.6 (default, Nov  4 2022, 01:56:04)  [GCC 4.4.7 20120313
                        (Red Hat 4.4.7-23)]]
          platform: yes [linux]
             tests: no  [skipping due to configuration]
            macosx: no  [Mac OS-X only]

      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed

× Encountered error while generating package metadata.
╰─> See above for output.

note: This is an issue with the package mentioned above, not pip.
hint: See above for details.

any tips?

My Stack post https://unix.stackexchange.com/questions/724191/pip-rust-libc-so-6-error-centos

cuviper commented 1 year ago

CentOS 6 is no longer a supported platform since Rust 1.64, as announced here: https://blog.rust-lang.org/2022/08/01/Increasing-glibc-kernel-requirements.html

You might be able to get a newer glibc working, but I wouldn't advise that, and the kernel will be harder to deal with. The safer route would be to limit yourself to 1.63.0, and you'll have to manually install that since rustup also updated to follow the new minimum requirements. You can find the offline installer here:

https://static.rust-lang.org/dist/rust-1.63.0-x86_64-unknown-linux-gnu.tar.gz

I can't tell you if that version will be sufficient for python cryptography though, and the Rust project only provides support for the current stable version. For that reason, I am closing this issue.