Can not finish albany spack install since trilinos failed to be installed

[ludydulimi]

==> Installing trilinos-master-xa74easea3aklzidtvhratrjmciwfati [33/34] ==> No binary for trilinos-master-xa74easea3aklzidtvhratrjmciwfati found: installing from source ==> No patches needed for trilinos ==> trilinos: Executing phase: 'cmake' ==> trilinos: Executing phase: 'build' ==> Error: ProcessError: Command exited with status 2: 'make' '-j8'

4 errors found in build log: 177170 492 | #warning "The ThyraEpetraAdapters package is deprecated" 177171 | ^~~ 177172 In file included from /tmp/me/spack-stage/spack-stage-trilin os-master-xa74easea3aklzidtvhratrjmciwfati/spack-src/packages/pi ro/src/Piro_Epetra_InvertMassMatrixDecorator.cpp:51: 177173 /tmp/me/spack-stage/spack-stage-trilinos-master-xa74easea3ak lzidtvhratrjmciwfati/spack-src/packages/thyra/adapters/epetra/sr c/Thyra_EpetraLinearOp.hpp:528:2: warning: #warning "The ThyraEp etraAdapters package is deprecated" [-Wcpp] 177174 528 | #warning "The ThyraEpetraAdapters package is deprecated" 177175 | ^~~

177176 /tmp/me/spack-stage/spack-stage-trilinos-master-xa74easea3ak lzidtvhratrjmciwfati/spack-src/packages/piro/src/Piro_Epetra_Sol verFactory.hpp:53:10: fatal error: NOX_Epetra_Observer.H: No suc h file or directory 177177 53 | #include "NOX_Epetra_Observer.H" 177178 | ^~~~~~~ 177179 compilation terminated. 177180 make[2]: [packages/piro/src/CMakeFiles/piro.dir/build.make:1 49: packages/piro/src/CMakeFiles/piro.dir/Piro_Epetra_SolverFact ory.cpp.o] Error 1 177181 make[2]: Waiting for unfinished jobs.... 177182 In file included from /tmp/ne/spack-stage/spack-stage-trilin os-master-xa74easea3aklzidtvhratrjmciwfati/spack-src/packages/th yra/adapters/epetra/src/Thyra_EpetraThyraWrappers.hpp:46, 177183 from /tmp/me/spack-stage/spack-stage-trilin os-master-xa74easea3aklzidtvhratrjmciwfati/spack-src/packages/st ratimikos/src/Stratimikos_LinearSolverBuilderdecl.hpp:53, 177184 from /tmp/me/spack-stage/spack-stage-trilin os-master-xa74easea3aklzidtvhratrjmciwfati/spack-build-xa74eas/p ackages/stratimikos/adapters/belos/src/../../../src/Stratimikos LinearSolverBuilder.hpp:1, 177185 from /tmp/me/spack-stage/spack-stage-trilin os-master-xa74easea3aklzidtvhratrjmciwfati/spack-src/packages/st ratimikos/src/Stratimikos_DefaultLinearSolverBuilder.hpp:46, 177186 from /tmp/me/spack-stage/spack-stage-trilin os-master-xa74easea3aklzidtvhratrjmciwfati/spack-src/packages/te ko/src/Teko_InverseLibrary.hpp:56,

 ...

 177339      286 | #warning "The Epetra package is deprecated"
 177340          |  ^~~~~~~
 177341    /tmp/me/spack-stage/spack-stage-trilinos-master-xa74easea3ak
           lzidtvhratrjmciwfati/spack-src/packages/thyra/adapters/epetra/sr
           c/Thyra_EpetraLinearOp.hpp:528:2: warning: #warning "The ThyraEp
           etraAdapters package is deprecated" [-Wcpp]
 177342      528 | #warning "The ThyraEpetraAdapters package is deprecated"
 177343          |  ^~~~~~~
 177344    make[2]: Leaving directory '/tmp/me/spack-stage/spack-stage-
           trilinos-master-xa74easea3aklzidtvhratrjmciwfati/spack-build-xa7
           4eas'

177345 make[1]: [CMakeFiles/Makefile2:10489: packages/piro/src/CMak eFiles/piro.dir/all] Error 2 177346 make[1]: Leaving directory '/tmp/me/spack-stage/spack-stage- trilinos-master-xa74easea3aklzidtvhratrjmciwfati/spack-build-xa7 4eas' 177347 make: [Makefile:169: all] Error 2

See build log for details: /tmp/me/spack-stage/spack-stage-trilinos-master-xa74easea3aklzidtvhratrjmciwfati/spack-build-out.txt

==> Warning: Skipping build of albany-develop-r436elt3hb4cmlgrvmfxaprnvuk35jmg since trilinos-master-xa74easea3aklzidtvhratrjmciwfati failed ==> Error: albany-develop-r436elt3hb4cmlgrvmfxaprnvuk35jmg: Package was not installed ==> Error: Installation request failed. Refer to reported errors for failing package(s).

Even I haved installed two trilinos using Spack and cmake. The albany can not be built. What can I do? I used Ubuntu 24.04 VM.

[ikalash]

Which version of spack are you checking out? Is it from the main spack repo? That spack version is not supported for Albany. A supported version can be found here: https://github.com/E3SM-Project/spack (though I am not 100% sure if this is open-source or if permission needs to be granted - you could have a look and see).

[ludydulimi]

I tried to install the E3SM spack again. There is a new problem occurring.  ==>Error: Package 'spack.pkg.builtin.libc' not found. Use 'spack create' to create a new package. Did you mean one of the following packages? libxc glibc libxcb My spack version is 0.22.0.dev0 (f2e410d95ab9c3f9ad28995b9858d77d1d272739). I used  $ git clone -c feature.manyFiles=true https://github.com/E3SM-Project/spack/ $ cd spack/bin $ ./spack install zlibcommands to install it. My Ubuntu version is 24.04 LTS. Thank you for your kind reply. It helps me a lot.

[ikalash]

I have never seen this error. It looks like you are trying to install zlib rather than Albany. To install Albany, I would suggest doing, for example for a gcc-11.1.0 compiler that exists on the machine:

spack --insecure install --dirty --keep-stage albany@develop%gcc@11.1.0

You'd have to edit ~/.spack/linux/compilers.yaml to point to the compiler.

[ludydulimi]

Thank you for your help. Everything is okay when I used spack --insecure install --dirty --keep-stage albany@develop%gcc@13.2.0 with edited compilers.yaml.

[ikalash]

Great! Can we close this issue?

[ludydulimi]

Of course.