Closed muffato closed 4 months ago
nf-core lint
overall result: Passed :white_check_mark: :warning:Posted for pipeline commit c17c1c2
+| ✅ 132 tests passed |+
#| ❔ 20 tests were ignored |#
!| ❗ 1 tests had warnings |!
The CI error looks like Nextflow 24.01-edge doesn't understand the closures from conf/base.config
any more ?! It may be related to bumping the Groovy version in that release.
Something I forgot to include in the previous release, and became a necessity now that we're running both genome-note and blobtoolkit: both need to default to the same lineage ! We will fix that properly in a later release, cf https://github.com/sanger-tol/genomenote/issues/100
PR checklist
nf-core lint
).nextflow run . -profile test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.README.md
is updated (including new tool citations and authors/contributors).