sanger-tol / readmapping

Nextflow DSL2 pipeline to align short and long reads to genome assembly. This workflow is part of the Tree of Life production suite.
https://pipelines.tol.sanger.ac.uk/readmapping
MIT License
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Switch to nf-core samtools modules #117

Open tkchafin opened 2 months ago

tkchafin commented 2 months ago

Description of feature

It looks like several of the samtools modules can be switched to nf-core versions

tkchafin commented 2 months ago

contribute samtools_addreplacerg