Defluqe/FULLQUAD Recombinant KP.1.1.3/MC.1 (5 sequences)

[FedeGueli]

Recombinant between KP.1.1.3 branch with C4423T, C7083T (orf1a:S2273F) and a MC.1 branch with S:R346T and T28978A with a breakpoint after 19723: all before it Kp.1.1.3 all after it KP.3.1.1)

Private mutations:A17864G,G21055A Query: C4423T, A17864G,G21055A Samples: 3 ( 2 patients) Places: US (tX) Australia (GBW)

https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice32_genome_test_170b5_7ac5e0.json?label=id:node_11672991

Originally posted by @FedeGueli in https://github.com/sars-cov-2-variants/lineage-proposals/issues/1838#issuecomment-2380619510

Zoom on Parents:

https://cov-spectrum.org/explore/World/AllSamples/Past3M/variants?%2FAllSamples%2FPast3M%2Fvariants%3FnextcladePangoLineage=JN.1*&aaMutations=S%3AR346T&nucMutations=T28978A&nextcladePangoLineage=MC.1*&nucMutations1=A17864G%2CC4423T%2CC7083T&nucMutations2=C4423T%2CC7083T&nextcladePangoLineage2=KP.1.1.3*&analysisMode=CompareEquals&

[FedeGueli]

+1 NY

[xz-keg]

+1 PA