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sbslee / pypgx

A Python package for pharmacogenomics (PGx) research
https://pypgx.readthedocs.io
MIT License
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correct hg38 coordinate chr10:102830835 A>G #135

Closed NeiH4207 closed 4 months ago

sbslee commented 4 months ago

@NeiH4207,

Thank you so much for the PR! I confirm your correction:

gnomAD UCSC Genome Browser (GRCh38) UCSC Genome Browser (GRCh37)

Could you please share with me how you come across this error? Are you currently working on genotyping CYP17A1?

NeiH4207 commented 4 months ago

I encountered a mismatch error in HG38 for this variant while double-checking all variants on the custom microarray chip I am designing, which includes PGx variants. Thank you for your valuable work in the PGx research community.