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squidpy_notebooks
Tutorials for Squidpy
https://squidpy.readthedocs.io/en/stable/
MIT License
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example for ImageContainer.apply
#83
dineshpalli
closed
2 years ago
0
[pre-commit.ci] pre-commit autoupdate
#82
pre-commit-ci[bot]
closed
2 years ago
0
Dev
#81
michalk8
closed
3 years ago
1
update tangram
#80
giovp
closed
3 years ago
1
scrna-sea and mFISH example
#79
FADHLyemen
closed
3 years ago
5
Update Tangram tutorial
#78
michalk8
closed
3 years ago
1
merge dev
#77
giovp
closed
3 years ago
1
Clean envs
#76
michalk8
closed
3 years ago
3
add note to tangram
#75
giovp
closed
3 years ago
2
Add regen for repo dispatch and dev
#74
michalk8
closed
3 years ago
1
new tutorial layout
#73
giovp
closed
3 years ago
0
add four i tutorial
#72
giovp
closed
3 years ago
0
update tutorials.rst in squidpy
#71
hspitzer
closed
3 years ago
1
Revert moran
#70
michalk8
closed
3 years ago
0
update contributing guide
#69
hspitzer
closed
3 years ago
4
new graph examples
#68
giovp
closed
3 years ago
1
Fix spellcheck and enable linkcheck
#67
michalk8
closed
3 years ago
0
stardist segmentation example
#66
AnnaChristina
closed
3 years ago
7
added external cellpose tutorial notebook
#65
SabrinaRichter
closed
3 years ago
9
add image container and graph examples/tutorials
#64
hspitzer
closed
3 years ago
20
Add Cellprofiler tutorial
#63
LouisK92
closed
3 years ago
2
new notebooks / examples
#62
hspitzer
closed
2 years ago
8
cell type visualization with segmentation mask
#61
YubinXie
closed
3 years ago
1
Use squidpy.gr.spatial_autocorr
#60
michalk8
closed
3 years ago
0
Update tutorials
#59
michalk8
closed
3 years ago
1
tangram 0.3.0 removes mapping_optimizer.MapperConstrained
#58
asabjorklund
closed
3 years ago
2
Fix conda inst instruction
#57
michalk8
closed
3 years ago
0
fix instruction to install locally with conda
#56
softbear
closed
3 years ago
1
imctutorial squidpy environment install fail
#55
mezwick
closed
3 years ago
4
Fix regen
#54
michalk8
closed
3 years ago
1
change readme for deployment
#53
giovp
closed
3 years ago
0
Add docs regen
#52
michalk8
closed
3 years ago
0
formulation changes
#51
SabrinaRichter
closed
3 years ago
1
Add binder
#50
michalk8
closed
3 years ago
6
Change external tutorial titles
#49
michalk8
closed
3 years ago
3
update dic for ligrec
#48
giovp
closed
3 years ago
1
Comment on tutorial_read_spatial
#47
jwrth
closed
3 years ago
5
Contributing guide
#46
hspitzer
closed
3 years ago
4
Fix image examples for new API
#45
hspitzer
closed
3 years ago
2
Revert move tutorials
#44
michalk8
closed
3 years ago
1
Cleanup v2
#43
michalk8
closed
3 years ago
1
Img container example
#42
davidsebfischer
closed
3 years ago
5
spatial graph example
#41
Koncopd
closed
3 years ago
1
Refactor testing
#40
michalk8
closed
3 years ago
13
init cleanup
#39
giovp
closed
3 years ago
6
Add support for fixed tutorials
#38
michalk8
closed
3 years ago
13
nhood enrichment test
#37
ilibarra
closed
3 years ago
0
Ex graph permutation tests
#36
ilibarra
closed
3 years ago
0
add external tutorial on using DL features
#35
hspitzer
closed
3 years ago
2
References in squidpy_notebooks
#34
hspitzer
closed
3 years ago
2
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