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sdparekh / zUMIs

zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
GNU General Public License v3.0
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Question related to feature names of gene expression matrix. #302

Closed diyang1354 closed 2 years ago

diyang1354 commented 2 years ago

Hi, Can zUMI directly generate a matrix with gene symbols as feature names instead of gene ids? Thanks.

sdparekh commented 2 years ago

zUMIs generates a tab delimited text file of geneID to gene name mapping based on user provided GTF file. It should be within zUMIs output folder.