sdsc-ordes / modos-api

Python API to manage multi-omics digital objects
https://sdsc-ordes.github.io/modos-api
Apache License 2.0
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Add support for BCF format #36

Closed cmdoret closed 4 months ago

cmdoret commented 4 months ago

MODO now supports remote streaming of CRAM files. The test dataset of the genome center is mainly BCF files, therefore we need to implement the same feature for variant files.

Requirements:

AssafSternberg commented 4 months ago

stream_genomics already supports BCF files, both reading and writing to,