snakemake / snakemake-github-action

A Github action for running a Snakemake workflow
MIT License
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chore: trigger new release to pull in latest snakemake #36

Closed dlaehnemann closed 1 year ago

dlaehnemann commented 1 year ago

Currently, the snakemake-github-action seems to pull in a broken version of snakemake, with a bug that has since been fixed. So simply pulling in the latest release should fix this.

Current error message when using module import:

Rule convert_pfam is not defined in this workflow.

See e.g. here: https://github.com/snakemake-workflows/rna-seq-kallisto-sleuth/actions/runs/5865262889/job/15901825940#step:4:18

dlaehnemann commented 1 year ago

This should have been fixed by a manual change to the Docker container by @johanneskoester.