sorgerlab / indra

INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and databases to collect knowledge, and through a process of assembly, produce causal graphs and dynamical models.
http://indra.bio
BSD 2-Clause "Simplified" License
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Extend to Python 3.12 compatibility #1443

Closed bgyori closed 3 months ago

bgyori commented 3 months ago

This PR extends testing to Python 3.12. This required publishing some new kappy wheels on PyPI and adding a test requirement for PySB. Otherwise things seem to be working other than some unrelates test failures due to ACSN.