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stamatak / ExaML

Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI
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libmpi.so.40: cannot open shared object file: No such file or directory #19

Closed markusruhsam closed 10 months ago

markusruhsam commented 10 months ago

I installed Examl according to the manual and theparse-examl commands are working, however, if I use the examlcommand I get this error examl: error while loading shared libraries: libmpi.so.40: cannot open shared object file: No such file or directory. I found this post https://github.com/theislab/cellrank/issues/864 where a similar error was solved usingconda install -c conda-forge openmpi=4.1.2, however this didn't solve the problem for me as the libraries installed are named slightly different libmpi_mpifh.so and libmpi_mpifh.so.40. Any help is appreciated!

stamatak commented 10 months ago

Examl is not maintained any more, please use RAxML-NG https://github.com/amkozlov/raxml-ng which implements all features of ExaML for supercomputers and is also faster.