state-spaces / mamba

Mamba SSM architecture
Apache License 2.0
12.57k stars 1.06k forks source link

Great Apes Classification Task #193

Open leannmlindsey opened 6 months ago

leannmlindsey commented 6 months ago

I could not find any detail about the "great apes classification task". This is not the same species classification task used in the HyenaDNA paper and so I am curious as to the number of species you used, and how related they were. I am also curious as to why you did not compare the HyenaDNA 7M parameter model with the Mamba 7M parameter model (They have one listed in Table 4.3 Chromatin Profile Prediction).

albertfgu commented 6 months ago

The task details are described in Sections 4.3.3 and Appendix E.3.4. We did not use a 7M Hyena model with context length 1M because we trained all these models from scratch and it was not necessary for our comparisons. Our comparisons are between

leannmlindsey commented 6 months ago

Thank you so much. Sorry that I missed that on my first reading of the paper!