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stevekm / reportIT

IonTorrent variant reporting pipeline for clinical interpretation of cancer panel results
GNU General Public License v3.0
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need script to run pipeline from samplesheet #26

Closed stevekm closed 7 years ago

stevekm commented 7 years ago

For development, and end-user usage, it will help to have a script that can read a samplesheet of analysis ID's for processing, and run the pipeline for each. Also need this to work with paired samples specified in the sheet.