stjudecloud / workflows

Bioinformatics workflows developed for and used on the St. Jude Cloud project.
MIT License
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fix(tools/picard): make VALIDATION_STRINGENCY SILENT the default #140

Closed a-frantz closed 5 months ago

a-frantz commented 6 months ago

^Tiitle

Brought to my attention by a user with files that were failing during Picard steps due to a MAPQ>0 for unmapped reads. This should fix that.