Sourcery refactored main branch

[sourcery-ai[bot]]

Branch main refactored by Sourcery.

If you're happy with these changes, merge this Pull Request using the Squash and merge strategy.

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To manually merge these changes, make sure you're on the main branch, then run:

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[sourcery-ai[bot]]

Sourcery Code Quality Report

✅  Merging this PR will increase code quality in the affected files by 0.80%.

Quality metrics	Before	After	Change
Complexity	2.93 ⭐	2.22 ⭐	-0.71 👍
Method Length	40.88 ⭐	40.59 ⭐	-0.29 👍
Working memory	6.93 🙂	6.92 🙂	-0.01 👍
Quality	79.90% ⭐	80.70% ⭐	0.80% 👍

Other metrics	Before	After	Change
Lines	446	443	-3

Changed files	Quality Before	Quality After	Quality Change
genomics_algo/algorithms.py	65.05% 🙂	67.23% 🙂	2.18% 👍
genomics_algo/helper.py	84.00% ⭐	83.86% ⭐	-0.14% 👎
genomics_algo/tests/test_helper.py	84.97% ⭐	84.97% ⭐	0.00%

Here are some functions in these files that still need a tune-up:

File	Function	Complexity	Length	Working Memory	Quality	Recommendation
genomics_algo/algorithms.py	get_occurences_with_boyer_moore_exact_matching	13 🙂	114 🙂	13 😞	49.56% 😞	Extract out complex expressions
genomics_algo/tests/test_helper.py	test_get_freq_for_qualities	0 ⭐	66 🙂	23 ⛔	60.18% 🙂	Extract out complex expressions
genomics_algo/algorithms.py	get_occurences_with_naive_match	6 ⭐	62 🙂	10 😞	68.65% 🙂	Extract out complex expressions
genomics_algo/tests/test_helper.py	test_get_base_freq	0 ⭐	46 ⭐	11 😞	75.23% ⭐	Extract out complex expressions

Legend and Explanation

The emojis denote the absolute quality of the code:

• ⭐ excellent
• 🙂 good
• 😞 poor
• ⛔ very poor

The 👍 and 👎 indicate whether the quality has improved or gotten worse with this pull request.

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Please see our documentation here for details on how these metrics are calculated.

We are actively working on this report - lots more documentation and extra metrics to come!

Let us know what you think of it by mentioning @sourcery-ai in a comment.