taxprofiler / taxpasta

TAXnomic Profile Aggregation and STAndardisation
https://taxpasta.readthedocs.io/
Apache License 2.0
34 stars 7 forks source link

Add KrakenUniq #34

Closed sofstam closed 2 years ago

sofstam commented 2 years ago
codecov-commenter commented 2 years ago

Codecov Report

Base: 91.55% // Head: 91.78% // Increases project coverage by +0.22% :tada:

Coverage data is based on head (d0116e6) compared to base (5ccef5f). Patch coverage: 96.29% of modified lines in pull request are covered.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## dev #34 +/- ## ========================================== + Coverage 91.55% 91.78% +0.22% ========================================== Files 81 85 +4 Lines 1078 1132 +54 Branches 68 71 +3 ========================================== + Hits 987 1039 +52 - Misses 74 75 +1 - Partials 17 18 +1 ``` | [Impacted Files](https://codecov.io/gh/taxprofiler/taxpasta/pull/34?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None) | Coverage Δ | | |---|---|---| | [...pplication/krakenuniq/krakenuniq\_profile\_reader.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/34/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL2tyYWtlbnVuaXEva3Jha2VudW5pcV9wcm9maWxlX3JlYWRlci5weQ==) | `83.33% <83.33%> (ø)` | | | [...rc/taxpasta/infrastructure/application/\_\_init\_\_.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/34/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL19faW5pdF9fLnB5) | `100.00% <100.00%> (ø)` | | | [...ucture/application/application\_service\_registry.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/34/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL2FwcGxpY2F0aW9uX3NlcnZpY2VfcmVnaXN0cnkucHk=) | `91.15% <100.00%> (+0.49%)` | :arrow_up: | | [.../infrastructure/application/krakenuniq/\_\_init\_\_.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/34/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL2tyYWtlbnVuaXEvX19pbml0X18ucHk=) | `100.00% <100.00%> (ø)` | | | [...cture/application/krakenuniq/krakenuniq\_profile.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/34/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL2tyYWtlbnVuaXEva3Jha2VudW5pcV9wcm9maWxlLnB5) | `100.00% <100.00%> (ø)` | | | [...uniq/krakenuniq\_profile\_standardisation\_service.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/34/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL2tyYWtlbnVuaXEva3Jha2VudW5pcV9wcm9maWxlX3N0YW5kYXJkaXNhdGlvbl9zZXJ2aWNlLnB5) | `100.00% <100.00%> (ø)` | | | [...a/infrastructure/application/supported\_profiler.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/34/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL3N1cHBvcnRlZF9wcm9maWxlci5weQ==) | `100.00% <100.00%> (ø)` | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None)

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