MIDS Mapping to ABCD

[DavidFichtmueller]

The MIDS draft v1.16 from 2022-05-28 already has some mappings to ABCD terms, but it only has them to ABCD 3 and the mappings are incomplete and in some cases wrong. So we looked into the mappings a bit more and created the table below for the mappings between MIDS and both ABCD 3 (concept URI) and ABCD 2 (both concept URI and XPath). I hope this helps with the alignment of MIDS and ABCD. Please let me know if you have any other questions.

Prefixes:

• abcd: = http://rs.tdwg.org/abcd/terms/
• abcd2: = http://rs.tdwg.org/abcd2/terms/

MIDS Term	ABCD 3 Term	ABCD 2 Term	ABCD 2 Xpath	Comment
Modified	abcd:DataSet with abcd:hasDateModified	abcd2:DataSet-DateModified	/DataSets/DataSet/Metadata/RevisionData/DateModified
Modified	abcd:Unit with abcd:hasDateModified	abcd2:Unit-DateLastEdited	/DataSets/DataSet/Units/Unit/DateLastEdited	alternative modified date on record level
PhysicalSpecimenId	abcd:Unit with abcd:id	abcd2:UnitID	/DataSets/DataSet/Units/Unit/UnitID
PhysicalSpecimenId	abcd:Unit with abcd:guid	abcd2:UnitGUID	/DataSets/DataSet/Units/Unit/UnitGUID
Institution - Code	abcd:Unit abcd:sourceInstitutionID	abcd2:SourceInstitutionID	/DataSets/DataSet/Units/Unit/SourceInstitutionID
Institution - Referent	abcd:DataSet with abcd:hasOwner (of class abcd:Person) with abcd:hasOrganization with abcd:guid	abcd2:DataSet-Owner-OrganisationGUID	/DataSets/DataSet/Metadata/Owners/Owner/Organisation/OrganisationGUID	has:Owner can both point to a person or an organization, if it is person, use has:Organization to get to the organization for its GUID
Institution - Referent	abcd:DataSet with abcd:hasOwner (of class abcd:Organization) with abcd:guid			this is if the owner is the organization
Institution - Referent	abcd:Unit with abcd:hasOwner (of class abcd:Person) with abcd:hasOrganization with abcd:guid	abcd2:Unit-Owner-OrganisationGUID	/DataSets/DataSet/Units/Unit/Owner/Organisation/OrganisationGUID	alternative owner on the record level, again with both ways to get the Org GUID
Institution - Referent	abcd:Unit with abcd:hasOwner (of class abcd:Organization) with abcd:guid
SpecimenType	abcd:Unit with abcd:hasRecordBasis	abcd2:RecordBasis	/DataSets/DataSet/Units/Unit/RecordBasis
ObjectType	abcd:Unit with abcd:kindOfUnit	abcd2:KindOfUnit	/DataSets/DataSet/Units/Unit/KindOfUnit
Name	abcd:ScientificName with abcd:fullScientificName	abcd2:TaxonIdentified-FullScientificNameString	/DataSets/DataSet/Units/Unit/Identifications/Identification/Result/TaxonIdentified/ScientificName/FullScientificNameString
Name	abcd:IdentifiedTaxon with abcd:informalName	abcd2:TaxonIdentified-InformalNameString	/DataSets/DataSet/Units/Unit/Identifications/Identification/Result/TaxonIdentified/InformalNameString
Name	abcd: ZoologicalScientificName with abcd:namedIndividual	abcd2:TaxonIdentified-NamedIndividual	/DataSets/DataSet/Units/Unit/Identifications/Identification/Result/TaxonIdentified/ScientificName/NameAtomised/Zoological/NamedIndividual
License	abcd:DataSet with abcd:hasLicense (of class abcd:LegalStatement)	abcd2:DataSet-License-Text	/DataSets/DataSet/Metadata/IPRStatements/Licenses/License/Text
License	abcd:Unit with abcd:hasLicense (of class abcd:LegalStatement)	abcd2:Unit-License-Text	/DataSets/DataSet/Units/Unit/IPRStatements/Licenses/License/Text	alternative license on record level
PreparationType	abcd:Preparation with abcd:preparationType	abcd2:SpecimenUnit-PreparationType	/DataSets/DataSet/Units/Unit/SpecimenUnit/Preparations/Preparation/PreparationType

[snsb-seifert]

MIDS Class	ABCD3 Term	ABCD2 Term	ABCD2 XPath	comment
QualitativeLocation		Gathering_LocalityText	/DataSets/DataSet/Units/Unit/Gathering/LocalityText
QualitativeLocation		Gathering_Country	/DataSets/DataSet/Units/Unit/Gathering/Country
QualitativeLocation		Gathering_Biotope	/DataSets/DataSet/Units/Unit/Gathering/Biotope
QualitativeLocation		Gathering_NamedAreas	/DataSets/DataSet/Units/Unit/Gathering/NamedAreas
QualitativeLocation		Gathering_Gathering_NearNamedPlaces_Gathering_Gathering_NearNamedPlaces_NamedPlaceRelation_NearNamedPlace	/DataSets/DataSet/Units/Unit/Gathering/NearNamedPlaces/NamedPlaceRelation/NearNamedPlace
QualitativeLocation		Gathering_AreaDetail	/DataSets/DataSet/Units/Unit/Gathering/AreaDetails
QuantitativeLocation		Gathering_SiteCoordinateSets	/DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets
QuantitativeLocation		Gathering_GML	/DataSets/DataSet/Units/Unit/Gathering/GML
QuantitativeLocation		Gathering_WFS	/DataSets/DataSet/Units/Unit/Gathering/WFS
QuantitativeLocation		Gathering_WMSURL	/DataSets/DataSet/Units/Unit/Gathering/WMSURL	WMS URL with center coordinate given
CollectingAgent		Gathering_Agents_GatheringAgent	/DataSets/DataSet/Units/Unit/Gathering/Agents/GatheringAgent
DateCollected		Gathering_DateTime	/DataSets/DataSet/Units/Unit/Gathering/DateTime
CollectingNumber		Unit_CollectorsFieldNumber	/DataSets/DataSet/Units/Unit/CollectorsFieldNumber
Media		Unit_Unit_MultiMediaObjects_MultiMediaObject	/DataSets/DataSet/Units/Unit/MultiMediaObjects/MultiMediaObject
GeologicalAge		PalaeontologicalUnit_TimeRange	/DataSets/DataSet/Units/Unit/PalaeontologicalUnit/TimeRange
GeologicalAge		Stratigraphy_ChronostratigraphicTerms	/DataSets/DataSet/Units/Unit/Gathering/Stratigraphy/ChronostratigraphicTerms/ ChronostratigraphicTerm
TypeStatus		Unit_Unit_SpecimenUnit_NomenclaturalTypeDesignations_NomenclaturalTypeDesignation_TypeStatus	/DataSets/DataSet/Units/Unit/SpecimenUnit/NomenclaturalTypeDesignations/NomenclaturalTypeDesignation/TypeStatus	Cell
CollectorID			N/A
ScientificNameID			N/A
GeographicalLocalityID			N/A
IdentifiedByID			N/A
AssociatedMediaID			N/A
Mass

[DavidFichtmueller]

I have transferred the mappings from here into the SSSOM format, however since I could not edit this table , I created a copy of the file and added a new work sheet for the ABCD mapping. It is a first draft and there are still many things to be optimized, but it gives us a basis for discussion. One of the structural changes that I did was the addition of a column xpath (I am still not sure, which property to use to semantically describe it, maybe create one under the tdwgutils: group), as the xpath is the practical link between the URI of the concept to its content in the XML structure. But we can discuss this later, how to best integrate them.

[matdillen]

Could the xpath be labeled as object_source?