theislab / ncem

Learning cell communication from spatial graphs of cells
https://ncem.readthedocs.io/
BSD 3-Clause "New" or "Revised" License
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Question about r2 values #160

Open showvikbiswas opened 11 months ago

showvikbiswas commented 11 months ago

Question

Hi @AnnaChristina. In the _evaluate_per_nodetype function, are the $r^2$ values calculated averages over all gene expression predictions for a given cell type?