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tlambert03 / LLSpy

Lattice light-sheet post-processing utility.
http://llspy.readthedocs.io
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Error : 'TiffPage' object has no attribute 'bits_per_sample' #5

Closed hhakozaki closed 6 years ago

hhakozaki commented 6 years ago

When I specify folder which contain LLSM tiff data, v0.3.7 cause this error.

image

With executable distributed with Dropbox - v0.3.4 - won't cause this error and register folder fine.

BTW I really appreciate your effort to share your work.

Hiro.

tlambert03 commented 6 years ago

Hi Hiro, and thanks for the bug report.

That bug is caused by API change in an update in one of the dependencies (tifffile). I didn't specify a tifffile version in my dependencies at first, so if you recently installed it, you got that new (broken) version. (and the reason it works in the executable is that the older version of tifffile is bundled in it).

However, this problem is already fixed in version 0.3.8, which is available. Just do conda update llspy in your llsenv environment.

hhakozaki commented 6 years ago

Hi Talley, Thank you for the information. I updated and confirmed it was fixed.

It is great that your software utilize all available GPU. I have Tesla K20 and GTX 760 it worked great with these GPUs.

Thank you for your work and sharing it with LLSM Community.

Hiro.

On Thu, Mar 22, 2018 at 3:43 PM Talley Lambert notifications@github.com wrote:

Hi Hiro, and thanks for the bug report.

That bug is caused by API change in an update in one of the dependencies (tifffile). I didn't specify a tifffile version in my dependencies at first, so if you recently installed it, you got that new (broken) version. (and the reason it works in the executable is that the older version of tifffile is bundled in it).

However, this problem is already be fixed in version 0.3.8 https://github.com/tlambert03/LLSpy/releases/tag/0.3.8, which is available. Just do conda update llspy in your llsenv environment.

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/tlambert03/LLSpy/issues/5#issuecomment-375481655, or mute the thread https://github.com/notifications/unsubscribe-auth/ALvLi1lN9P7vFgZS-zYGppaUZDZ6CbJcks5thCktgaJpZM4S32BB .

tlambert03 commented 6 years ago

Great! Glad that fixed your problem, and glad you find it helpful. Please don’t hesitate to report additional bugs as you find them (big or small).