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trackmate-sc / TrackMate

TrackMate is your buddy for your everyday tracking.
https://imagej.net/plugins/trackmate
GNU General Public License v3.0
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TrackMate StarDist custom model path error when using batcher #301

Open jpylvanainen opened 4 months ago

jpylvanainen commented 4 months ago

Hi,

I have been trying to use a custom made StarDist model to process multiple files through the batcher. I get an error "Model file path is not set." in the batcher log window. image

When using the custom StarDist model in TrackMate directly, the detection works well. I created a xml file with the and used it in the batcher, as instructed.

Thanks, Joanna

jpylvanainen commented 2 months ago

Hey @tinevez, have you had a chance to take a look at this issue? :)

tinevez commented 2 months ago

Not yet sorry.