Add --label option to use instead of the filename

tseemann / mlst

:id: Scan contig files against PubMLST typing schemes

GNU General Public License v2.0

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Add --label option to use instead of the filename #55

Closed tseemann closed 6 years ago

tseemann commented 6 years ago

This is like SISTR does. Good idea.

tseemann commented 6 years ago

This is only useful when running on ONE ISOLATE SEQUENCE otheriwse the same label will be given to different samples. Use --nopath in that case, or post-process with sed.