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uclahs-cds / pipeline-align-DNA

Nextflow pipeline to align paired DNA FASTQs and sort, mark duplicates, and index resulting alignment
https://uclahs-cds.github.io/pipeline-align-DNA/
GNU General Public License v2.0
4 stars 1 forks source link

Bump external/nextflow-config from `f3448ac` to `bc3f67e` #318

Closed dependabot[bot] closed 5 months ago

dependabot[bot] commented 6 months ago

Bumps external/nextflow-config from f3448ac to bc3f67e.

Commits
  • bc3f67e Merge pull request #64 from uclahs-cds/nwiltsie-process-afterscript
  • e703579 Merge pull request #66 from uclahs-cds/czhu-fix-schema
  • 7069230 update changelog
  • 5227dc1 Update config/schema/schema.config
  • 1671182 Merge branch 'main' into nwiltsie-process-afterscript
  • fae7c33 File.getAbsolutePath returns a string..
  • d667569 fix absolutePath -> getAbsolutePath
  • cdd3194 1. convert path to absolute in check_path 2. try catch to print out parameter...
  • 795384d Merge pull request #65 from uclahs-cds/nwiltsie-static-upgrade
  • 89e5ce2 Upgrade to latest static analysis Action
  • Additional commits viewable in compare view


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nwiltsie commented 5 months ago

@dependabot rebase

nwiltsie commented 5 months ago

Beep boop, a script is posting on @nwiltsie's behalf.

The following NFTest cases completed successfully:

Summary log file: /hot/software/pipeline/pipeline-align-DNA/Nextflow/development/unreleased/dependabot/submodules/external/nextflow-config-bc3f67e/log-nftest-20240531T195637Z.log