Closed skanwal closed 9 months ago
@pdiakumis - as discussed in our 1-1 last week, moved database logic to R script and updated rmd as well.
Tested locally on my machine and the code works with the rds file under inst/extdata/tx_gene_id_105.rds
.
Comparing reports between rnasum-rpackage
and update/ensembldb
branches next.
Draft PR:
To discuss
get_ensembl_db
not exported fromnamespace:RNAsum
ensembldb
select. It is also mentioned in the vignette. Need to confirm if it's referring to anotherselect
method.