umccr / cwl-ica

A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide
MIT License
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Revisit BCLConvert pipeline #564

Closed alexiswl closed 2 months ago

alexiswl commented 2 months ago

Emulate the BCLConvert 4.2.7 nf pipeline but swap out the bclconvert cpu hardware for dragen hardware to generate the ora files

image

alexiswl commented 2 months ago

Nm, Illumina BSSH Autolaunch only supports nextflow pipelines.

victorskl commented 2 months ago

😿

alexiswl commented 2 months ago

Related https://github.com/umccr-illumina/ica_v2/issues/203