uni-medical / SAM-Med3D

SAM-Med3D: An Efficient General-purpose Promptable Segmentation Model for 3D Volumetric Medical Image
Apache License 2.0
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Data structuring is inefficient? #67

Open joseph-bae opened 1 month ago

joseph-bae commented 1 month ago

Hi,

Thank you very much for releasing this code and the model weights. It is a very interesting and valuable project.

I have a question about the dataset structure that is required for validation and inference. Is it the case that for every label, a copy of the corresponding image must be saved? This seems very inefficient for datasets with multiple labels like Totalsegmentator as you would have many copies of a single CT in the different folders for heart, lung, etc.